v2.2.6 scope review #197

calchoo · 2019-06-03T17:22:08Z

BugFixes

clustering producing invalid rearrangement #189 Fix clustering bug by shifting start of second breakpoint for intra-chromosomal breakpoint merges
dash being inserted between letters in gene names while annotating with ncrna file #195 BugFix from the 2.2.5 release where these were defaulted to strings instead of arrays

Features

Bugfix/add clustering tests

Issue #195: Restore the aliases to be a list not a single string

calchoo and others added 19 commits May 14, 2019 14:30

Adding tests for integration bug

9741930

Lint with black

92a2b24

Add deploy dependencies and update dev instructions

7d0593f

Update gitignore for pytest

0908b02

Link to dev instructions from the main readme

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lint with black

3322863

Update tests for indel shift

fe14a0b

Shift by 1 for inversions

4757c35

Lint with black

514eb69

Test python3.7

f9797c0

Add instructions to run tox tests

61c27d1

Add tox to test deps

b4cc451

Add 3.7 to tox

a8c8370

Ignore tox

8a39acf

Add setting for python3.7+

5ddaf94

Add readthedocs config and remove unused files

8c9d72a

Issue #195: Restore the aliases to be a list not a single string

2a399c9

Merge pull request #194 from bcgsc/bugfix/add_clustering_tests

98a746e

Bugfix/add clustering tests

Merge pull request #196 from bcgsc/bugfix/issue-195-annotation-aliases

a76ae08

Issue #195: Restore the aliases to be a list not a single string

calchoo requested a review from creisle June 3, 2019 17:22

calchoo self-assigned this Jun 3, 2019

calchoo added this to the v2.2.6 milestone Jun 3, 2019

creisle approved these changes Jun 3, 2019

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calchoo merged commit 64bf0f8 into master Jun 3, 2019

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